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Introduction & Overview

Our world as we know it would not exist without fungi. Fungi form symbiotic relationships with all other organisms: plants, animals (ourselves included), protists, bacteria as well as other fungi. These interactions occur in all terrestrial and aquatic ecosystems, including Antarctica. Fungi also provide essential ecosystem functions and are responsible for a majority of the decomposition and nutrient recycling processes on the planet. Over 400 million years ago, fungi helped plants transition onto land as they emerged from aquatic environments; nearly all plants today rely on fungi for nutrients, water and protection. Thus, fungi in their intimate co-evolution with other organisms have ensured and continue to ensure the functioning of the natural world on which all life depends. 

Despite fungi’s enormous contributions to the shaping of our ecosystems, it is estimated that more than 90% of fungal species remain unknown to science. For centuries, fungi were dismissed as lower plants, and even though they were granted their own biological kingdom in 1969, they remain under-researched. It is important to include fungi in conservation frameworks as fungi are essential for ecosystem functioning and the survival of other species. In particular, fungi are integral to ecosystem recovery and yet, almost half of fungal species evaluated to date by the International Union for the Conservation of Nature are threatened with extinction. 

NAMA’s Conservation and Stewardship Committee conducted a joint literature review of research and perspectives on fungal conservation. Based on our review, we have compiled a list of pertinent questions relating to fungal conservation along with resources arranged for both an overview of the subject and a look into some of the scientific literature we recommend.

For an overview of fungal conservation concerns, start with these: 

Conservation of abundance: How fungi can contribute to rethinking conservation.
Barron, E. S. (2023).  Conservation and Society, 21(2), 99-109. (Read here.)

Reframing the conservation focus towards collectivity and abundance rather than individuality and scarcity.

A fungal perspective on conservation biology.
Heilmann‐Clausen, J., Barron, E.S., Boddy, L., Dahlberg, A., Griffith, G.W., Nordén, J., Ovaskainen, O., Perini, C., Senn‐Irlet, B. and Halme, P. (2015). Conservation biology, 29(1), 61-68. (Read here.)

An ecosystem-based approach to biodiversity and conservation with consideration of fungi in concert with plants and animals.

Kew Royal Botanical Garden’s State of The World’s Plants and Fungi (2023).

Based on research papers from many international teams of scientists, the Kew report focuses on the latest knowledge on the diversity and geographical distribution of plants and fungi, critical data which underlies conservation efforts. Pages 60-65 are dedicated to fungi.

Recognition of the discipline of conservation mycology.
May, T.W., Cooper, J.A., Dahlberg, A., Furci, G., Minter, D.W., Mueller, G.M., Pouliot, A. and Yang, Z. (2018). Conserv. Biol, 33(3), 733-36. (Read here.)

An overview of recent innovations in mycology resulting in formal conservation assessments of fungi as decomposers, mycorrhizae, parasites, epiphytes, and sources of food, habitat and tools for other organisms and human societies.

What do the first 597 global Fungal Red List Assessments tell us about the threat status of Fungi?
Mueller, G.M., Cunha, K.M., May, T.W., Allen, J.L., Westrip, J.R., Canteiro, C., Costa-Rezende, D.H., Drechsler-Santos, E.R., Vasco-Palacios, A.M., Ainsworth, A.M. and Alves-Silva, G. 2022. (2022). Diversity, 14(9), 736. (Read here.)

How the milestone of 500+ assessed fungi shapes the research agenda for conservation mycology to assist both the assessment process and the implementation of management.

Conservation mycology is a multidisciplinary practice aimed not only toward conserving fungi, but also their relationships to other organisms as decomposers, mycorrhizae, endophytes, pathogens and lichens. Conserving fungi promotes ecosystem balance while simultaneously supporting the other species with which fungi are associated. Conservation mycology links taxonomy, ecology, biogeography, demographics, and population genetics, and builds on advances in digital technology, genetic coding and, not least, the growth of community science. These contributions include monitoring fungal species ranges and populations. The development of conservation principles for fungi will evolve over time, particularly as we continue to discover and describe fungal species. The documentation of fungal biodiversity and ecology will be essential to informing our conservation efforts.

The articles below review some of the challenges encountered by conservationists in establishing the discipline of conservation mycology:

  1. the differences between customary ecosystem management and the unique approaches required by fungi;
  2. the current techniques used by fungal conservationists to identify species, distributions, habitats and relationships with other organisms;
  3. the role of threat-status assessments and the methods for mitigation of threats;
  4. the role of socio-political approaches.

Further Reading

Conservation of abundance: How fungi can contribute to rethinking conservation.
Barron, E. S. (2023). Conservation and Society, 21(2), 99-109. (Read here.)

Delimitation of Funga as a valid term for the diversity of fungal communities: the Fauna, Flora & Funga proposal (FF&F).
Kuhar, F., Furci, G., Drechsler-Santos, E.R. and Pfister, D.H. (2018) IMA Fungus 9, A71–A74 . (Read here.)

Addressing uncertainty: how to conserve and manage rare or little-known fungi. Fungal Ecology4(2), 134-146.
Molina, Randy, Thomas R. Horton, James M. Trappe, Bruce G. Marcot.(2011). Fungal Ecology 4(2), 134-146. (Read here.)

What do the first 597 global Fungal Red List Assessments tell us about the threat status of Fungi? 
Mueller, G.M., Cunha, K.M., May, T.W., Allen, J.L., Westrip, J.R., Canteiro, C., Costa-Rezende, D.H., Drechsler-Santos, E.R., Vasco-Palacios, A.M., Ainsworth, A.M. and Alves-Silva, G. 2022. (2022). Diversity, 14(9), 736. (Read here.)

From high in the atmosphere to deep sea sediments, fungi are everywhere. They comprise an incredibly diverse kingdom of life that have been influencing Earth’s ecologies for over 1 billion years. They exist in both macroscopic and microscopic forms and their metabolic needs and interspecies symbioses drive their functional diversity. A complete understanding of fungal ecological roles remains elusive due to their largely cryptic nature and the fact that more than 90% of fungal species remain unknown to science. It is estimated that approximately 2,500 new fungal species are discovered and described annually. This growth in knowledge of fungal diversity and their functional traits, demonstrates with certainty that fungi provide imperative functions on spatial and temporal scales. Fungal ecosystem services are unique and irreplaceable, differing from those of plants, animals and other microorganisms. 

Fungi evolved 1 billion years ago while land plants evolved an estimated 850 million years ago. Thus, fungi have been interacting with plants at least since their transition onto land. These intimate interactions lead to co-evolution, where both fungi and plants drive the evolution of each other,  resulting in varieties of complex plant-fungal relationships. There is a growing body of evidence which suggests that mycorrhizal fungi (fungi that engage in nutrient transfer with the roots of plants) facilitated the migration of early plants from oceans onto land by serving as their primary nutrient uptake mechanism. These associations persist today and over 90% of extant terrestrial plant families form mycorrhizae. Due to these ancient interdependencies, most plants cannot survive without their root-associated fungal symbionts, nor would the ecosystems in which they are found. Delving deeper, endophytic fungi live within the cells of plant roots, leaves, stems, flowers and seeds and play important roles in supporting plant immune function, conferring stress tolerance, increasing defense mechanisms and improving seed germination.

Fungi are remarkable chemical innovators and produce arrays of compounds, enzymes and acids used for nutrient acquisition, defense, host signaling, mating, and dispersal, to name a few of their functions. Many of these enzymes are incomparably effective at breaking down wood and cellulose, two of the strongest and most abundant polymers on the planet. Fungi are principal contributors to decomposition and nutrient cycling in both terrestrial and aquatic environments.These same degradative enzymes and acids are responsible for the remediative potential of fungi in degrading anthropogenic pollutants such as plastic polymers. In terrestrial ecosystems, fungi play imperative roles in the formation and maintenance of soils, contributing to biogeochemical cycling, plant nutrient uptake, soil structural dynamics, moisture retention and carbon storage to name a few. A recent review by Hawkins et al. (2023) estimates that each year, 13.12 gigatons of CO2 fixed by land plants is allocated to mycorrhizal fungal mycelium, equating to approximately 36% of current annual anthropogenic CO2 emissions from the burning of fossil fuels.

Fungi are also ubiquitous in freshwater and marine systems, serving as substantial decomposers of marine detritus, important parasites of fish and other vertebrates, as well as endophytes of keystone plant species like seagrasses and mangroves. Fungi have been isolated from the tissues of sea sponges, corals, sea cucumbers, marine sediments and more.The roles these fungi are playing in the microbiome of aquatic organisms remains, for the most part, a mystery. 

Fungi provide food for many organisms from bacteria to humans, and their secondary compounds are used in medicine and provide protection and defense for their symbiotic partners. Every year, hundreds of new compounds are found in fungi that might hold promise as treatments for chronic human diseases or bioactive compounds with the potential to replace the need for broad-spectrum insecticides in agricultural settings. Fungi play vital roles in the microbiome of numerous animals from termites to cows to humans. They also serve as insect mutualists and parasites as well as agents of disease involved in insect and plant population regulation.

Growing evidence suggests that fungi bridge levels of biological and ecological organization from their specific symbiotic interactions to biome-scale processes, serving as significant ecological and evolutionary driving forces. We are just beginning to understand the complex web of interactions fungi engage in and the myriad ecosystem services they offer. Without proper conservation measures to protect fungi and their habitats, we might never know the full extent of what they do and how they impact living systems. One thing we do know is that the world would look very different without them!

Further Reading

Fungi as mediators linking organisms and ecosystems.
Bahram, Mohammad, and Tarquin Netherway.(2022).  FEMS Microbiology Reviews 46.2: fuab058. (Read here.)

Fungi in aquatic ecosystems.
Grossart, H.P., Van den Wyngaert, S., Kagami, M., Wurzbacher, C., Cunliffe, M. and Rojas-Jimenez, K. (2019). Nature Reviews Microbiology 17.6: 339-354. (Read here.)

Mycorrhizal mycelium as a global carbon pool. 
Hawkins, H.J., Cargill, R.I., Van Nuland, M.E., Hagen, S.C., Field, K.J., Sheldrake, M. (2023). Current Biology 33.11: R560-R573. (Read here.)

Fungal endophytes improve wheat seed germination under heat and drought stress. 
Hubbard, Michelle, James Germida, and Vladimir Vujanovic.(2012).  Botany 90.2): 137-149. (Read here.)

Fungal biodiversity and conservation mycology in light of new technology, big data, and changing attitudes.
Lofgren, Lotus A., and Jason E. Stajich. (2021). Current Biology 31.19: R1312-R1325. (Read here.)

The origin of land plants: a matter of mycotrophism.
Pirozynski, K. A., and D. W. Malloch. (1975).  Biosystems 6.3 (1975): 153-164. (Read here.)

Interactions between soil structure and fungi.
Ritz, Karl, and Iain M. Young.(2004).  Mycologist 18.2: 52-59. (Read here.)

Fungal endophytes: diversity and functional roles.
Rodriguez, R. J., et al.(2009).  New phytologist 182.2: 314-330. (Read here.)

Threats to fungi are largely the same as threats to other species. According to the International Union for the Conservation of Nature’s (IUCN) Global Fungal Red List Initiative, the primary threats are “habitat loss/degradation, followed by climate change, invasive species and pollution.” [1] More specific to fungi is the historical dearth of mycological research compared with other natural sciences. The Kew Botanical Gardens State of the World of 2023 points out “the lack of fungal inventories, reference collections, taxonomists and other resources.” [2] This lack of taxonomic expertise coupled with a lack of fungal reference collections contributed to the IUCN’s failure to include fungal species in its Red List assessments until 2013, 49 years after the establishment of the Global Red List in 1964. From 2013 to 2022, 48% of the 597 species evaluated by the IUCN were included on the Global Red List as vulnerable, endangered, or critically endangered.[1] Another 9% were listed as data deficient. For these species, there is insufficient information to assess threat status, but they could in reality be anywhere from secure to endangered. One assessment category, habitat type, revealed that the largest number of threatened fungi (73%) globally occur in forests (current as of September 2024). 

The authors of the Red List also remind us that threats occur synergistically.[1]  Fungi are necessary for forest ecosystem function, the extinction of key fungal species will negatively impact forest ecosystems, in turn leading to additional species extinctions.

Because fungi exist cryptically and are difficult to detect, a species approach to fungal conservation is extremely problematic. Fungal conservationists, therefore, advocate a more holistic, ecosystem approach to conserving fungi along with the habitats in which they occur. The cutting of old-growth forest, the replacement of native forests with tree plantations, the removal of peat from peat bogs, and other habitat destruction in urban development of meadows, sand dunes, and alpine areas negatively impacts fungal species and populations. [3] Agricultural use of fertilizer and pesticides also contributes to habitat loss through acidification, air pollution and eutrophication of fungal habitats.

The threats to fungi and other organisms are ongoing. The IUCN ranks the following by severity: 

  • Land Development
  • Agriculture
  • Logging
  • Climate Change and Severe Weather (drying of cloud forests, saltwater intrusion)
  • Fire and Fire Suppression
  • Invasive Species
  • Pollution
  • Disturbance
  • Transport and service corridors
  • Energy Production and Mining
  • Collecting
  • Water Management/Use
  • Other

One limitation of the IUCN’s report is that it only covers North America, Europe and parts of South America. The more mycologists and community scientists contribute to an understanding of both the services fungi perform for the ecological health of the planet as well as of the pervasive threats fungi face, the more they will be able to influence habitat management, land use planning, and government policies.

References 

  1. What do the first 597 global Fungal Red List Assessments tell us about the threat status of Fungi?  Mueller, G.M., Cunha, K.M., May, T.W., Allen, J.L., Westrip, J.R., Canteiro, C., Costa-Rezende, D.H., Drechsler-Santos, E.R., Vasco-Palacios, A.M., Ainsworth, A.M. and Alves-Silva, G. 2022. (2022). Diversity, 14(9), 736. (Read here.)
  2. Kew Royal Botanical Garden’s State of The World’s Plants and Fungi (2023).
  3. The future of Fungi in Europe: threats, conservation and management.  Arnolds, Eef. (2001). Fungal Conservation: Issues and Solutions. Cambridge U P, 2001. Pp. 64-80. (Read here.)

Further Reading 

Developing a comprehensive strategy for fungal conservation in europe: current status and future needs.
Dahlberg, A., Genney, D. R., & Heilmann-Clausen, J. (2010). Fungal Ecology3(2), 50–64. (Read here.)

A way forward for wild fungi in international sustainability policy. 
Oyanedel, R., Hinsley, A., Dentinger, B. T. M., Milner-Gulland, E. J., & Furci, G. (2022). Conservation Letters15(4). (Read here.)

A fungal perspective on conservation biology. 
Heilmann-Clausen J, Barron ES, Boddy L, Dahlberg A, Griffith GW, Nordén J, Ovaskainen O, Perini C, Senn-Irlet B, Halme P. (2015) Conserv Biol.; 29(1):61-8. (Read here.)

Generally, the largest threats to fungi are climate change, habitat loss, pollution, invasive species, and lack of awareness around the critical roles of fungi in maintaining healthy environments. If a species has a limited distribution and is under environmental stress, then harvesting of immature mushrooms, particularly as a commodity, can have a significantly negative impact on the population. A 2018 study by Hopping et al. on the caterpillar fungus (Ophiocordyceps sinensis) showed that niche commodity-level overharvesting of immature fruiting bodies combined with climate change is significantly reducing this species’ population in the Himalayas. Harvesting common species that have few threats, while allowing some mushrooms to reach maturity and be dispersed to favorable environments probably would not negatively impact a fungal population. Ultimately, the impact of harvesting depends on the species, its distribution, threat status, and the volume of harvesting prior to maturation and effective sporulation. 

Further Reading

Ecology and Management of the Commercially Harvested American Matsutake Mushroom
Hosford, D. (1997) 

Ecology and Management of Morels harvested from the forests of the western North America (2007) 
Pilz, D. (2007)

 

Fungal Diversity Survey (FUNDIS) is a nonprofit focused on fungal biodiversity and conservation in North America by partnering with scientists (community and professional), land managers, and conservationists. Fungal Diversity Survey (FUNDIS) protects biodiversity through the conservation of fungi and their habitats by increasing knowledge and public awareness of their diversity and distribution, equipping and engaging community scientists, and partnering with land managers, conservationists, and scientists.

Fungi Foundation approaches fungal biodiversity and conservation from an ecosystem perspective, focusing on fungi as the interconnectors of organisms in nature.

  • Fungal Conservation Tracker – a country-by-country overview of the global landscape on fungi conservation, presented in an interactive format by the Fungi Foundation. This project is still under development.

The International Union for the Conservation of Nature (IUCN) Red List Species Survival Commission is a science-based network of volunteers from around the world who track the status of species and threats to them, and help develop policies and guidelines toward conservation.

The Global Fungal Red List Initiative List (IUCN Working Group)

Natural heritage programs in the United States and Canadian provinces and territories support the field by conducting species assessments of mushrooms and lichenized fungi. Each program may have its own website, sometimes integrated with the government’s natural resources website, but most programs are in the NatureServe network. In particular, both the Pennsylvania Natural Heritage Program and the Oregon Biodiversity Information Center (Oregon’s natural heritage program) have personnel dedicated to fungi beyond lichens, and hopefully many more programs will follow suit in hiring mycology staff. 

NatureServe compilesand provides biodiversity data throughout North America and coordinates communication between North America’s 60+ natural heritage programs.

Society for the Protection of Underground Networks (SPUN) is a scientific research organization that maps critical mycorrhizal fungal communities worldwide and advocates for their protection.

 
  • Advocate for fungal awareness and inclusion in existing conservation frameworks.
  • Help inventory and monitor fungi – effective conservation depends on accurate data about what fungal species exist where.
  • Be inclusive of fungi in your language! Adopt the term “funga” and encourage others to do so as well. 
  • Remember too that lichens are also fungi. While lichens are a symbiosis between fungi and algae and/or cyanobacteria (and perhaps other organisms), they are classified based on the mycobiont – the fungal partner
  • Join a local mushroom club, there are over 90 NAMA affiliated clubs.
  • Support fungariums and natural history collections.
  • Look for target species of a Rare Fungi Challenge! (See fundis.org)
  • Let things rot – leave decomposing trees and other woody debris to support wood rotting fungi. Coarse woody debris and snags (standing dead trees) can offer habitat to fungi that aren’t satisfied by sticks and woodchips.
  • Volunteer with the regional and local fungal conservation initiatives listed above.
  • Monitoring fungi can help with identifying the spread of potential invasive fungi such as golden oysters, Pleurotus citrinopileatus.
  • Be cautious when cultivating nonnative species of fungi. Avoid discarding spent spawn in an area the fungus may find to be ideal for wild establishment.
  • Volunteer with native plant restoration projects and non-native plant management.
  • Advocate for and support actions to support biodiverse soils and avoid soil erosion.
  • Reduce or avoid fertilizer use. Build soil health.
  • Retain large veteran trees and maintain varied age classes in your forest.
  • Learn about forest and fungal succession toward old growth, their contribution toward carbon sequestration and biodiversity, and comment on upcoming timber sales in your area. 
  • Contact your state’s natural heritage program, which is often housed in the department of natural resources (Network Directory | NatureServe).
  • Write to your state legislators expressing your support for fungal conservation in policy initiatives.
  • If your state doesn’t have an official state mushroom or state lichen, start a campaign and include some candidate species that lend themselves to talking about conservation!

Further Reading

Fungal Conservation: Issues and Solutions
David Moore, Marijke M. Nauta, Shelley E. Evans and Maurice Rotheroe (2008). Cambridge University Press. (Read here.) 

Braiding Sweetgrass: Indigenous Wisdom, Scientific Knowledge and the Teachings of Plants.
Kimmerer, R. (2013). Milkweed.

  • The process of assessing a species’ conservation status includes evaluating population size, population trends, geographic range and threats. The process is often comparable across taxa, meaning that an endangered bird and an endangered lichen were evaluated with the same level of objectivity.

    The International Union for Conservation of Nature, better known as the IUCN, assesses species for the “Red List” using criteria that measures a species’ extinction risk.  Red Lists are critical indicators of the health of a region’s biodiversity. The IUCN has organized a Global Red List initiative dedicated to fungi to convey the urgency of conservation issues to the public and policymakers to help the international community reduce species decline and extinction. The IUCN Red List is widely recognized as the most comprehensive, objective global approach for evaluating the conservation status of animal, fungal, and plant species, and it has a large impact on establishing priorities in nature conservation. While Red Listing is mainly conducted at the global level, many nations in Europe have their own Red Lists. 

    NatureServe methodology is similar to that of the IUCN Red List, and increasingly, thanks to partnerships between IUCN and NatureServe, species are elevated for assessment using both approaches. At the subnational level (state/province/territory), natural heritage programs (which utilize NatureServe methodology) apply “S ranks” to species, whereas NatureServe applies “G ranks.” You can view S ranks and G ranks (and U.S. Endangered Species listing status) using the NatureServe Explorer (toggle off “Ecosystems” and select “Fungi” in Classification).

    For more on the fungal IUCN red list assessment process.

    For more about NatureServe conservation status ranks.

A fungarium is a natural history collection consisting of a curated collection of dried fungal specimens. Historically, fungal collections were housed with plants in these natural history collections and were referred to as herbaria. Many fungal collections are still housed under the term herbaria. There are many functions of these fungal natural history collections, including access to  a well-organized and classified fungal repository, which enables scientists, scholars, and mycologists to access fungal samples to address a myriad of research questions.. These invaluable collections serve as a record of the past and for the future. 

Fungaria are essential records which document the historical distributions of fungal taxa. These fungal collections serve as a physical record of the occurrence of a fungal sporocarp at a particular place at a particular time. These data are essential for monitoring changes in species distribution over time. These records are essential for illuminating how factors of climate change or other anthropogenic stressors may alter fungal species distributions and populations. 

In addition to elucidating fungal species ranges and their associated changes, fungaria are essential to documenting fungal biodiversity. “Holotype” collections are used to define the particular species. These records are essential for comparison to understand whether subsequent fungal collections represent an already described species, or a new species. With the advancement of molecular tools, DNA from the fungi contained in fungaria are being assessed to better understand fungal biodiversity. In addition to the DNA contained in these fungal collections, other chemical compounds are contained within these collections. The biochemistry of these fungi are being used to understand fungal evolution and biodiversity as well as to explore the potential application of fungal compounds for medicine and industrial applications.

Fungaria can be created by individuals, but because of the effort and resources involved, these are more often created by institutions such as botanical gardens or universities. The largest fungarium in the world is in London at the KEW Botanic Gardens. In North America, there is a growing need for additional fungaria as mycological research expands. Today, most fungaria are a small subset of plant herbaria at large Universities. Vast digitization efforts have occurred in recent decades, allowing data from fungaria to be accessed via online consortia.

Index Herbariorum is an online database which indexes 3400 herbaria worldwide and their associated staff. You can search for botanical natural history collections near you and determine whether they contain fungal collections. Many fungal collections have been digitized and are available via MycoPortal. For lichens, visit the Consortium of Lichen Herbaria.

Acknowledgements

Thank you to the generous volunteer contributions of NAMA’s Conservation & Stewardship committee for compiling and summarizing the resources above: Aaron Tupac, Amy Honan, Deana Tempest Thomas, Glen Rogers, Greg Wolfe, Gyorgyi Voros, Hannah Huber, Nora Dunkirk, Ryath Beauchene, Taye Bright.

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